Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015862774.1_cds_XP_016515448.1_27792
CDS Infomation

[gene=LOC107832155] [db_xref=GeneID:107832155] [protein=putative F-box/FBD/LRR-repeat protein At5g56810] [protein_id=XP_016515448.1] [location=join(14007..15158,15245..15436,16268..16459)] [gbkey=CDS]
Sequence

ATGGAAGGGATGGAAGGGACAGATCAAATTTCGGAACTGCCAGTGTCGATTTTGGAGCAC
ATTCAGTCTTTACTTGTTGTTAAAGATGCTCTGAACACTAGTACATTGTCCAAGGCTTGG
AACAGTGCTTGGGCTTCCCTTTCCTGCTTAAATTTTGGTGATGATATTTTCAGCAAGTCA
AAGAACATTGTGAGTCGAATTCTAGCAGATCGGCAAAAGCAGAACATTTCTGTGCGAAAG
TTCATGGTAAAGTTACCATATGCTTCGTTAACCTCTAATTATGTGGATAATTGGATTAAT
ATACTGGTAGCCTGTAATATCAAAGAGTTGTCTATAGAGGTTGAACGCACACACACTTAC
ATCAAGTTGCCTGAAGCAATCTTTGCTGCCAAAGCTCTAAACATGCTTCGTTTAGGCGGA
TTTAAGCTCGAACTACCCTCTGATGGCGTAAAATTTTCATCTTTGCGAGAGTTATACCTT
GCTGAATCGTTTCTGGACGAGCAATTACTTCAAGCTCTATGCGCAAGCTGTAGCAATTTA
GAAGTTTTGTCTTTAAGTGGATTTCATGGACCAATCAGTTTACAAGTAGCAGGAACTTTA
CCTAAACTAAGGGCGGTATATTTGGAAGATTGCCCAGATCAATTCCAGATGGTTGATATT
GCAGCGCCTAATCTTAAAGACCTTGAAATTAGCTCCTTTTGTGAGGACCTACATGTAATT
AAGATAACTGCTTGCAAATCCCTAAAGCATTTGGAGCTCTTGACTGTTGAGGCTGTCACT
GACCAATGGTTAGAGGAGCTTCTTCCAAATATACCCAACCTTGAAATCTTTCACTTATCT
TGTTGTTCGTTGTGGAAGACCGTGAATATATCAAGTGATCGGCTCAAGTATTTCCAAGTA
ACTGCGTGCAATAATCTGATTGAGGTTGATTTAGATACTCCTAACTTACTAGGATTCTTA
TCTGATGTTCGTTATGGAGAAGATACTGTTGATCCCTTGCCCACATTCAATCTGAAAGCT
TCAAATCTGCTGGAAGCTTGTCTCTGTTTGATCCCAGAAACCCTTGACAATCCTTGGTAC
TCTAAGCTGATAAAGTCTCTTGGTAACTTTAATCATTGCAATGCTATCACTCTATGCTGT
GAGAATGACAAGGAGATAGTTATACCAAAAGACATGAGAGAGAACTTGCTTCCTCCACTT
TATGATGCTAAGTGTTTGCGTGTAACAATTATGAATCCATTGAATCATTCAGTTGTGGAC
GTTGTGGATAGTTTGCTTTGGATTTCTCCTCAACTGGACAGCCTATATTTTGGCTGCGGG
ACTGAAGACTTAAAGACCCTGAAGTTTACATCCAGAGATGCAGCTGATGATGAAGACGAG
AAACCTTGTTGTGCATCGATGCCTTGGAAATGTTGGAGGCATGAACTAAAGAAAGTTAAA
TTGAACAACTTTACATGTACGGAGCTGCAAGAGTTGAGAAACTACCTTCTCACAAATACA
GATATATTGGAGGAAATAATTGAAGTTCCACCATAA

Peptide Sequence

PEP ID

XP_016515448.1
PEP Infomation

PREDICTED: putative F-box/FBD/LRR-repeat protein At5g56810 [Nicotiana tabacum]
Sequence

MEGMEGTDQISELPVSILEHIQSLLVVKDALNTSTLSKAWNSAWASLSCLNFGDDIFSKS
KNIVSRILADRQKQNISVRKFMVKLPYASLTSNYVDNWINILVACNIKELSIEVERTHTY
IKLPEAIFAAKALNMLRLGGFKLELPSDGVKFSSLRELYLAESFLDEQLLQALCASCSNL
EVLSLSGFHGPISLQVAGTLPKLRAVYLEDCPDQFQMVDIAAPNLKDLEISSFCEDLHVI
KITACKSLKHLELLTVEAVTDQWLEELLPNIPNLEIFHLSCCSLWKTVNISSDRLKYFQV
TACNNLIEVDLDTPNLLGFLSDVRYGEDTVDPLPTFNLKASNLLEACLCLIPETLDNPWY
SKLIKSLGNFNHCNAITLCCENDKEIVIPKDMRENLLPPLYDAKCLRVTIMNPLNHSVVD
VVDSLLWISPQLDSLYFGCGTEDLKTLKFTSRDAADDEDEKPCCASMPWKCWRHELKKVK
LNNFTCTELQELRNYLLTNTDILEEIIEVPP

Transcript Sequence

Gene sequence data has not been registered.